Green Biotech Workshop

Date: September 22nd - 23rd 2022

Venue: Čejkovice, Hotel Chateau Zámek

Transport: Individual by car or public transport

Car: Address - Templářská 1, Čejkovice. The hotel site has an enclosed car park with a camera monitoring system.

Public transport: Possible by bus (bus stop "Čejkovice, u kostela"). Connection search on IDOS.

Accomodation: Single and double rooms

Event programme

Thursday, September 22nd
10:30	Arrival and Registration
11:30	Lunch
12:15	Jan Hejátko	SIGNAL INTEGRATION AND EPIGENETIC REPROGRAMING FOR PLANT PRODUCTIVITY – SINGING PLANT
12:50	Ian Bancroft; Department of Biology; University of York, York	USING GENOMICS TO ACCELERATE ALIEN INTROGRESSION AND RADIATION MUTAGENESIS IN OILSEED RAPE
13:25	Helene Robert Boisivon; Hormonal Crosstalk in Plant Development, CEITEC, Brno	HAIRY ROOT TRANSFORMATION AS A TOOL FOR BIOTECHNOLOGY IN BRASSICA NAPUS: FROM EXPRESSION ANALYSIS TO CRISPR-MEDIATED GENOME EDITING
14:00	Michal Franek; Chromatin Molecular Complexes, CEITEC, Brno	CORRELATIVE ELECTRON AND SUPER-RESOLUTION MICROSCOPY ON PLANT SAMPLES
14:25	Coffee Break
14:35	Jan Bartoš; Centre of Plant Structural & Functional Genomics, Institute of Experimental Botany, Olomouc	GENOME ANALYSIS FOR CROP IMPROVEMENT
15:10	Katrina Leslie Nicolas; Functional Genomics and Proteomics of Plants, CEITEC, Brno	PRIMARY CYTOKININ RESPONSES ACROSS THE BRASSICACEAE FAMILY
15:45	Jan Skalák; Functional Genomics and Proteomics of Plants, CEITEC, Brno	PHYA-DEPENDENT PHOSPHORYLATION OF AHP3 REGULATES CYTOKININ-MEDIATED PHOTOMORPHOGENIC RESPONSES
16:20	Coffee Break
16:30	Lenka Burketová; Laboratory of Pathological Plant Physiology, Institute of Experimental Botany, Prague	STIMULATION OF PLANT IMMUNE SYSTEM AS AN ALTERNATIVE WAY TO TRADITIONAL CROP PROTECTION MEASURES
17:05	Klára Panzarová; PSI, Drásov	NOVEL PHENOTYPING TOOLS – ADVANCES AND CHALLENGES
17:40	Gabriela Lochmanová; Proteomics Core Facility, CEITEC, Brno	CHARACTERIZATION OF HISTONE PTMS – PROJECT SUMMARY
18:15	Coffee Break
18:25	Vladislav Čurn; Biotechnological Centre, University of South Bohemia in Ceske Budejovice	BIOTECHNOLOGY AND MOLECULAR BIOLOGY - NEW TOOLS AND APPLICATIONS IN PLANT BREEDING
19:00	Ivo Frébort; CATRIN-CRH, Czech Advanced Technology and Research Institute, Olomouc	MOLECULAR FARMING IN BARLEY
19:35	Discussion
20:45	Dinner

Friday, September 23rd
8:00	Miroslav Klíma; Stress biology and biotechnology for breeding, Crop Research Institute, Prague	BIOTECHNOLOGY IN RAPESEED BREEDING IN THE CZECH REPUBLIC
8:35	Veronika Balakhonova Functional Genomics and Proteomics of Plants, CEITEC, Brno	HIGH-RESOLUTION MONITORING OF CHLOROPHYLL BIOSYNTHESIS DURING ARABIDOPSIS DEETIOLATION
9:10	Natália Melicherová Department of Bioanalytical Instrumentation, Institute of Analytical Chemistry, Brno	“IN-VIVO" STUDYING OF PLANT SAPS COMPOSITION BY LABORATORY-BUILT CAPILLARY ELECTROPHORESIS DEVICE
9:45	Coffee Break
9:50	Evgeny Gladilin Image Analysis, IPK, Gatersleben	PHENOTYPING PLANTS AND PLANT PARTS USING AUTOMATED IMAGE ANALYSIS
10:25	Sajid Ullah; Plant Sciences Core Facility, CEITEC, Brno	HIGH-THROUGHPUT IMAGE ANALYSIS USING CONVOLUTION NEURAL NETWORKS
11:00	Ján Šmeringai Plant Sciences Core Facility, CEITEC, Brno	ROOT AND SHOOT PHENOTYPING – PERSPECTIVE TOOL IN PLANT SCIENCE
11:35	Petr Tarkowski CATRIN-CRH, Czech Advanced Technology and Research Institute and Crop Research Institute, Olomouc	HYPHENATED TECHNIQUES AS TOOLS FOR PLANT GROWTH/DEVELOPMENT MONITORING AND PLANT PRODUCT QUALITY ASSESSMENT
12:10	Jan Hejátko Functional Genomics and Proteomics of Plants, CEITEC, Brno	Summary
12:45	Discussion
13:45 14:15	Lunch Discussion on possible further cooperation

SINGING Plant, Green Biotech Meeting

Venue: Úvaly

Date: Sep 10 – 11 2020

Sep 10

10:00 – 10:30 Jan Hejatko: Welcome and administrative issues

10:30 - 11:00 Helen Robert-Boisivon: Thermomorphogenesis in Brassica napus seeds

11:00 – 11:30 Ioannis Spyroglou: Morphology based root zonation in Arabidopsis roots using a changepoint detection based tool

11:30 – 11:45 Miloslava Fojtová: Distinct responses of Arabidopsis telomeres and transposable elements to the zebularine exposure

11:45 – 12:00 Michal Franek: Studying the chromatin of DNA repeats using fiber technology

Lunch

13:30 – 14:00 Gabriela Lochmanová: Current strategies for plant histone characterization by mass spectrometry – possibilities, limitations, and application

14:00 – 14:30 Jan Skalák: Natural genetic variability in multistep phosphorelay as a framework for targeted plant genome editing

14:30 – 15:00 Klára Panzarová: State-of-art in plant phenotyping: current status, novel advances and future plans

Coffee break

15:30 – 16:30 Petr Smýkal: Ecological genomics to uncover the adaptive role of seed dormancy (and drough tolerance) in legumes

16:30 – 17:30 David Honys: Songs of Death/Songs of Life: Well Orchestrated Journey of Pollen Tubes in the Pistil

17:30 – 18:30 Discussion

Dinner

Sep 11

Breakfast

7:30 – 9:30 Meeting of RA leaders and external representatives

9:30 – 10:00 Natália Melicherová: Development of instrumentation for "in vivo" analysis of plant sap by capillary electrophoresis

10:00 – 10:30 Eman Elrefaay: The effect of chloroplast redox state and auxin on chloroplast division

10:30 – 11:00 Sharmila Madhavan: PIN6 dependent auxin transport modulates the plant morphology and improved tolerance under salinity stress in Arabidopsis

11:00 - 11:30 Discussion

Lunch

Departure

Green Biotech Workshop

Date: Mon, Aug 26 2019

Venue: Faculty of Agriculture, Biotechnological Centre, Na Sadkach 1780, CZ-37005 Ceske Budejovice

9:45 – 10:00 Vladislav Curn: Welcome and introducing Biological centre and the Department of genetics and special plant production

10:00 – 10:15 Jan Hejatko: SINGING Plant – using the fundamental research in crops improvement

10:15 – 10:30 Klara Panzarova: State-of-art technologies for plant phenotyping

Coffee break

10:45 – 11:15 Ian Bancroft: Genomics-led radiation mutagenesis in rapeseed

11:15 – 11:45 Vladislav Curn: Breeding for abiotic stress tolerance - new methods and approaches

Lunch

12:30 – 13:00 Karel Klem: Adaptation of crops and crop production systems to climate change

13:00 – 13:30 Jaroslav Záhora: Implications of mutual interactions between plant roots and soil microorganisms for agroecosystem function in a changing environment

13:30 – 14:00 Vilem Reinohl

14:00 – 16:00 Phenotyping workshop

17:30 Dinner and discussion